Orthogonal field agarose-gel electrophoresis (OFAGE) of chromosomes fr
om translocation-bearing and normal Neurospora crassa strains was util
ized, first, to recover cosmids from a translocated region, and second
, to map translocation breakpoints. Surprisingly, the right breakpoint
s in two independently derived, interstitial translocations, T(II -->
III) AR18 and T(II --> VI)P2869, are within about 5.6 kbp of each othe
r suggesting that this region of linkage group (LG) II may be fragile
or otherwise subject to chromosome breakage. Mapping translocation bre
akpoints through OFAGE, or other similar methods, should allow for DNA
sequencing across breakpoints that are not associated with mutant phe
notypes or that are not within walking distance of cloned markers.