L. Grivet et al., RFLP MAPPING IN CULTIVATED SUGARCANE (SACCHARUM SPP) - GENOME ORGANIZATION IN A HIGHLY POLYPLOID AND ANEUPLOID INTERSPECIFIC HYBRID, Genetics, 142(3), 1996, pp. 987-1000
Sugarcane cultivars are polyploid, aneuploid, interspecific hybrids be
tween the domesticated species Saccharum officinarum and the wild rela
tive S. spontaneum. Cultivar chromosome numbers range from 100 to 130
with similar to 10% contributed by S. spontaneum. We have undertaken a
mapping study on the progeny of a selfed cultivar, R570, to analyze t
his complex genome structure. A set of 128 restriction fragment length
polymorphism probes and one isozyme was used. Four hundred and eight
markers were placed onto 96 cosegregation groups, based on linkages in
coupling only. These groups could tentatively be assembled into 10 ba
sic linkage groups on the basis of common probes. Origin of markers wa
s investigated for 61 probes and the isozyme, leading to the identific
ation of 80 S. officinarum and 66 S. spontaneum derived markers, respe
ctively. Their distribution in cosegregation groups showed better map
coverage for the S. spontaneum than for the S. officinarum genome frac
tion and occasional recombination between the two genomes. The study o
f repulsions between markers suggested the prevalence of random pairin
g between chromosomes, typical of autopolyploids. However, cases of pr
eferential pairing between S. spontaneum chromosomes were also detecte
d. A tentative Saccharum map was constructed by pooling linkage inform
ation for each linkage group.