CORRELATED MOTIONS AND PROPAGATION OF THE EFFECT OF A LOCAL CONFORMATIONAL CHANGE IN THE TRANSMEMBRANE HELIX OF THE C-ERBB2 ENCODED PROTEINAND IN ITS V659E MUTANT, STUDIED BY MOLECULAR-DYNAMICS SIMULATIONS
N. Garnier et al., CORRELATED MOTIONS AND PROPAGATION OF THE EFFECT OF A LOCAL CONFORMATIONAL CHANGE IN THE TRANSMEMBRANE HELIX OF THE C-ERBB2 ENCODED PROTEINAND IN ITS V659E MUTANT, STUDIED BY MOLECULAR-DYNAMICS SIMULATIONS, Biophysical chemistry, 58(3), 1996, pp. 225-237
A detailed study of the dynamical behavior of the 29-residue peptide i
ncluding the transmembrane domain of p185(c-erbB2) oncogene-encoded pr
otein and of its V659E mutant is presented. In a first part of this wo
rk we analyse equal time correlation coefficients between the backbone
dihedral angle fluctuations. Concerted motions are observed in the wi
ld type transmembrane a-helix but not in the corresponding V659E intra
membrane domain. The difference observed in the correlation pattern is
attributed to the single amino acid replacement. In a second part, we
investigate the propagation of the effect of a local conformational c
hange along the transmembrane segment, one of the dominant hypotheses
for signal transduction mechanisms of transmembrane receptors. The ana
lysis of angular time correlation functions together with that of the
response of the different residues to a local disturbance applied at t
he N-terminal side evidences a propagation phenomenon for the wild typ
e peptide. This effect is much less clear for the mutated peptide. Fur
thermore we show that the first one is much more flexible than the sec
ond one.