BK virus (BKV) DNA sequences were identified in a papillary urothelial
bladder carcinoma by Southern blot hybridization. The carcinoma conta
ined both integrated and extrachromosomal DNA. Integrated sequences ha
d a clonal restriction pattern, suggesting that BKV was integrated at
some early stage of neoplastic initiation or progression. Viral episom
es consisted of a population of covalent polymers based on a high-mole
cular-weight DNA unit, about 11-12 kb in size. DNA sequences non-homol
ogous to the BKV genome were encompassed within DNA episomes, suggesti
ve of acquisition of cellular sequences by viral DNA replication at th
e integration site. Extrachromosomal, chimeric DNA molecules were pres
ent at an average level of about 50 copies per cell, but their size, a
pparently incompatible with viral assembly, showed that BKV productive
infection was impaired. The data suggest that infected cells underwen
t reversible changes affecting autonomous BKV DNA replication.