BACTERIAL DISEASES OF RICE .2. CHARACTERIZATION OF PATHOGENIC BACTERIA ASSOCIATED WITH SHEATH ROT COMPLEX AND GRAIN DISCOLORATION OF RICE IN THE PHILIPPINES
B. Cottyn et al., BACTERIAL DISEASES OF RICE .2. CHARACTERIZATION OF PATHOGENIC BACTERIA ASSOCIATED WITH SHEATH ROT COMPLEX AND GRAIN DISCOLORATION OF RICE IN THE PHILIPPINES, Plant disease, 80(4), 1996, pp. 438-445
From over 5,600 bacteria isolated from rice plants with sheath rot com
plex and grain discoloration syndrome, and two batches of 1 kg of rice
seed (cultivars IR54 and 1R8866), 204 pathogens were initially charac
terized by phenotypic tests, serology, and growth on selective media,
and further distinguished by API 20NE, Biolog, and cellular fatty acid
methyl ester-fingerprints. The best differentiation was obtained by t
he Biolog system. The nonfluorescent pathogens were represented by clu
sters D1 (Burkholderia glumae, formerly Pseudomonas glumae) and E (Aci
dovorax avenae subsp. avenae, formerly Pseudomonas avenae). Seven clus
ters were distinguished among the fluorescent strains associated with
sheath rot complex and grain discoloration. Cluster A5 was identified
as Pseudomonas aeruginosa, and cluster B1 as P. fuscovaginae. Cluster
B2 is related to Pseudomonas aureofaciens, P. corrugata, FI fluorescen
s, and P. marginalis. Clusters B1 and B2 were only slightly different.
The strains identified as P. fuscovaginae were different from the typ
e strains in 2-ketogluconate production.