Regularly spaced nucleosomal arrays equilibrate between unfolded and h
ighly folded conformations in <2 mM MgCl2, and self-associate above 2
mM MgCl2 [Schwarz, P. M., & Hansen, J. C. (1994) J. Biol. Chem. 269, 1
6284-16289]. Hen we use analytical and differential sedimentation tech
niques to characterize the molecular mechanism and determinants of oli
gonucleosome self-association. Divalent cations induce self-associatio
n of intact nucleosomal arrays by binding to oligonucleosomal DNA and
neutralizing its negative charge. Neither linker histones nor H2A/H2B
dimers are required for Mg2+ dependent self-association. However, diva
lent cations are unable to induce self-association of trypsinized nucl
eosomal arrays lacking their N- and C-terminal core histone tail domai
ns. This suggests that the H3/H4, tail domains directly mediate oligon
ucleosome self-association through a non-Coulombic-based Self-associat
ion occurs independently of whether the oligonucleosome monomers are f
olded The first step in the self-association pathway is strongly coope
rative and produces a soluble association intermediate that sediments
similar to 10 times faster than the oligonucleosome monomers. The size
of the oligonucleosome polymers increases rapidly as a consequence of
small increases in the divalent cation concentration, eventually prod
ucing polymeric species that sediment at much greater than 10 000 S. I
mportantly, all steps in the self-association pathway are freely rever
sible upon removal of the divalent cations. Taken together, these data
indicate that short oligonucleosome fragments composed of only core h
istone octamers and DNA possess all of the structural features require
d to achieve chromosome-level DNA compaction. These findings provide a
molecular basis for explaining many of the recently uncovered structu
ral features of interphase and metaphase chromosomal fibers.