O. Herzberg et al., SWIVELING-DOMAIN MECHANISM FOR ENZYMATIC PHOSPHOTRANSFER BETWEEN REMOTE REACTION SITES, Proceedings of the National Academy of Sciences of the United Statesof America, 93(7), 1996, pp. 2652-2657
The crystal structure of pyruvate phosphate dikinase, a histidyl multi
phosphotransfer enzyme that synthesizes adenosine triphosphate, reveal
s a three-domain molecule in which the phosphohistidine domain is flan
ked by the nucleotide and the phosphoenolpyruvate/pyruvate domains, wi
th the two substrate binding sites approximate to 45 Angstrom apart, T
he modes of substrate binding have been deduced by analogy to D-Ala-D-
Ala ligase and to pyruvate kinase. Coupling between the two remote act
ive sites is facilitated by two conformational states of the phosphohi
stidine domain, While the crystal structure represents the state of in
teraction with the nucleotide, the second state is achieved by swiveli
ng around two flexible peptide linkers. This dramatic conformational t
ransition brings the phosphocarrier residue in close proximity to phos
phoenolpyruvate/pyruvate. The swiveling-domain paradigm provides an ef
fective mechanism for communication in complex multidomain/multiactive
site proteins.