The prevalence of Q fever pneumonia among children with atypical pneum
onia from whom only an acute-phase serum sample was available was trac
ed by using an indirect immunofluorescence (IF) test, nested PCR, and
isolation. Twenty (34.5%) of 58 sera were found to have both polyvalen
t and immunoglobulin M antibodies to the phase II antigen of Coxiella
burnettii by the IF test, Q fever pneumonia wets present in 23 (39.7%)
of 58 patients as determined by both the nested PCR and isolation and
in 20 patients as determined by the IF test, The sensitivities for ne
sted PCR and isolation were 100%, and that for the IF test was 87%, Ou
r results indicate that nested PCR was faster and more sensitive than
isolation and the IF test in the diagnosis of acute Q fever when a sin
gle acute-phase serum was available. These findings suggest that C. bu
rnetii is an important cause of atypical pneumonia in children in Japa
n.