FREE-ENERGY COMPUTATIONS ON THE SHIFT OF THE SPECIAL PAIR REDOX POTENTIAL - MUTANTS OF THE REACTION-CENTER OF RHODOBACTER-SPHAEROIDES

Citation
J. Apostolakis et al., FREE-ENERGY COMPUTATIONS ON THE SHIFT OF THE SPECIAL PAIR REDOX POTENTIAL - MUTANTS OF THE REACTION-CENTER OF RHODOBACTER-SPHAEROIDES, Journal of the American Chemical Society, 118(15), 1996, pp. 3743-3752
Citations number
50
Categorie Soggetti
Chemistry
ISSN journal
00027863
Volume
118
Issue
15
Year of publication
1996
Pages
3743 - 3752
Database
ISI
SICI code
0002-7863(1996)118:15<3743:FCOTSO>2.0.ZU;2-L
Abstract
Shifts of the special pair redox potential of photosynthetic reaction centers of Rhodobacter sphaeroides for five different mutants are cons idered. The shifts are calculated by the method of free energy perturb ation which is based on dynamics simulation data. The influence of the orientation and the torsion potential of the acetyl group on the shif t,of the redox potential is investigated and compared with recent resu lts obtained by solving Poisson's equation. Int the oxidized state of the special pair the acetyl group at DL reorients in the initial part of the dynamics simulation. As a consequence, the hydrogen bond with H (L168) breaks and the oxygen atom binds to the Mg2+ ion of DM. For I:h e mutant EY(M197) there is evidence that the acetyl oxygen atom of D-M binds to the Mg2+ ion of DL instead of forming a hydrogen bond with Y (M197).