The past several years have seen substantial progress in the developme
nt of antisense oligonucleotides as pharmacological tools and as thera
peutic agents. With properly designed and executed experiments, it has
been possible to demonstrate selective inhibition of gene expresssion
, owing to an antisense mechanisms of action both in cell culture-base
d experiments and in vivo. As the field has matured, it has also reali
zed that oligonucleotides can produce a variety of effects in cell cul
ture and in vivo that cannot be ascribed to an antisense mechanism of
action. Nevertheless, with proper controls it has been possible to dem
onstrate that the pharmacological activity of an oligonucleotide is co
nsistent with an antisense mechanism of action. The pharmacokinetic pr
operties of first-generation phosphorothioate oligodeoxynucleotides an
d their toxicological limitations have been characterized in rodents,
primates, and humans. Finally, it has been demonstrated that medicinal
chemistry can improve the properties of oligonucleotides, as several
modifications have been identified that have increased potency, altere
d pharmacokinetic properties and potentially decreased toxicological l
iabilities.