Antiviral therapy for AIDS has focused on the discovery and design of
inhibitors for two main enzyme targets of the human immunodeficiency v
irus type 1 (HIV)-reverse transcriptase (RT) and protease (PR). Despit
e several classes of promising new anti-HIV agents, the clinical emerg
ence of drug-resistant variants of HIV has severely limited the long-t
erm effectiveness of these drugs. Genetic analysis of resistant virus
has identified a number of critical mutations in the RT and PR genes.
Structural analysis of inhibitor-enzyme complexes and mutational model
ing studies are leading to a better understanding of how these drug-re
sistance mutations exert their effects at a structural level. These in
sights have implications for the design of new drugs and therapeutic s
trategies to combat drug resistance to AIDS.