The PheP protein is a high-affinity phenylalanine-specific permease of
the bacterium Escherichia coli, A topological model based on sequence
analysis of the putative protein in which PheP has 12 transmembrane s
egments with both N and C termini located in the cytoplasm had been pr
oposed (J. Pi, P. J. Wookey, and A. J. Pittard, J. Bacteriol. 173:3622
-3629, 1991), This topological model of PheP has been further examined
by generating protein fusions with alkaline phosphatase. Twenty-five
sandwich fusion proteins have been constructed by inserting the 'phoA
gene at specific sites within the pheP gene. In general, the PhoA acti
vities of the fusions support a PheP topology model consisting of 12 t
ransmembrane segments with the N and C termini in the cytoplasm, Howev
er, alterations to the model, affecting spans III and VI, were indicat
ed by this analysis and were supported by additional site-directed mut
agenesis of some of the residues involved.