ATP/ADP ratios were varied in different ways and the degree of negativ
e supercoiling was determined in Escherichia coil. Independent of whet
her the ATP/ADP ratio was reduced by a shift to anaerobic conditions,
by addition of a protonophore (dinitrophenol) or by potassium cyanide
addition, DNA supercoiling decreased similarly with the ATP/ADP ratio.
The experiments were performed under well-defined conditions, where o
xidative phosphorylation was the dominant route for ATP synthesis, i.e
. using a minimal salts medium with succinate as the sole free-energy
and carbon source, and in the presence or absence of ammonia as the ni
trogen source. The results of the different experiments were consisten
t with a single linear relationship between the log(ATP/ADP) and the c
hange in linking number. The dependence of DNA supercoiling on the ATP
/ADP ratio was not influenced by inhibitors of transcription or transl
ation. Because the ATP/ADP ratio was modulated in different ways, the
unique relationship suggests coupling between the phosphorylation pote
ntial and DNA supercoiling. This was most probably mediated by the DNA
gyrase, independent of topoisomerase I or transcription.