The development oi the thymus depends initially on epithelial-mesenchy
mal and subsequently on reciprocal lympho-stromal interactions. The ge
netic steps governing development and differentiation of the thymic mi
croenvironment are unknown. With the use of a targeted disruption of t
he whn gene, which recapitulates the phenotype of the athymic nude mou
se, the WHN transcription factor was shown to be the product of the nu
de locus. Formation of the thymic epithelial primordium before the ent
ry of lymphocyte progenitors did not require the activity of WHN. Howe
ver, subsequent differentiation of primitive precursor cells into subc
apsular, cortical, and medullary epithelial cells of the postnatal thy
mus did depend on activity of the whn gene. These results define the f
irst geneticallyd separable steps during thymic epithelial differentia
tion.