Av. Finkelshtein et Ov. Galzitskaya, FOLDING RATE AND STABILITY OF NATIVE STRUCTURE IN RANDOM AND EDITED CHAINS, Molecular biology, 30(1), 1996, pp. 91-96
The kinetics of reaching a ''native'' state in a simplest model hetero
polymer allowing link pairing was modeled numerically by the Monte Car
lo method in a broad range of temperatures and solvent quality. There
proved to be ''optimal'' conditions where the native structure is reac
hed rapidly, without exhausting all chain conformations. This process
is fast even for a random sequence; however, the resulting spatial str
ucture is thermodynamically unstable in this temperature and solvent q
uality range optimal for folding. At the same time, sequences speciall
y edited to reinforce the native structure are stable in the kinetical
ly optimal range, and thus only such chains rapidly reach a thermodyna
mically stable native state.