PURPOSE: To determine the repeatability and validity of a pattern-matc
hing method for the segmentation and measurement of hippocampi on magn
etic resonance (MR) images. MATERIALS AND METHODS: Comparable two-dime
nsional MR images obtained in 18 subjects (nine healthy control subjec
ts [six men, three women; aged 24-54 years] and nine patients with sch
izophrenia [six men, three women; aged 22-61 years]) were twice segmen
ted manually and twice segmented by using pattern matching with digita
l atlas transformation. The atlas transformation was accomplished in t
wo steps: global followed by local matching. Global matching was perfo
rmed with use of landmarks; local matching was performed with use of a
viscous fluid model. RESULTS: The mean percentage of difference betwe
en two atlas-based measurements was 1.33% +/- 1.23 (+/- standard devia
tion); that between two manual measurements was 4.67% +/- 4.71. The va
lidity of the atlas transformation measurements was demonstrated by me
ans of the high correlation (intraclass correlation coefficient = .96)
with manual segmentation measurements. Schizophrenic hippocampal area
s tended to be smaller; however, no differences in hippocampal shape w
ere found between patients with schizophrenia and patients with contro
l subjects. CONCLUSION: General pattern matching of a digital brain at
las to an individual MR image is a mathematically robust method of mea
surement that is reproducible and less variable than manual measuremen
t.