Ib. Rogozin et al., SOMATIC HYPERMUTAGENESIS IN IMMUNOGLOBULIN GENES .3. SOMATIC MUTATIONS IN THE CHICKEN LIGHT-CHAIN LOCUS, Biochimica et biophysica acta, N. Gene structure and expression, 1306(2-3), 1996, pp. 171-178
We report a new approach based on the Monte Carlo method, to analyze g
ene conversion. With this, we have examined 235 somatic mutations in t
he chicken V-lambda gene and found that about 75% of somatic mutations
significantly correlated with donor sequences in 25 pseudo V-lambda g
enes (set C) versus about 25% that did not (set N). The RGYW and TAA c
onsensus sequences of mutational hotspots were earlier revealed in mam
malian V genes. Analysis for correlation between somatic mutations in
the V-lambda gene and the consensus sequences showed that the somatic
mutations of set N were correlating with the consensus sequences (P(W
< W-random) < 0.01) and the somatic mutations of set C were not. Based
on further statistical analysis, we suggest that there must be at lea
st two mechanisms responsible for somatic hypermutagenesis in the V-La
mbda gene: gene conversion and another, which accounts for the elevate
d frequencies of somatic mutations at the RGYW and TAA consensus seque
nces.