SOMATIC HYPERMUTAGENESIS IN IMMUNOGLOBULIN GENES .3. SOMATIC MUTATIONS IN THE CHICKEN LIGHT-CHAIN LOCUS

Citation
Ib. Rogozin et al., SOMATIC HYPERMUTAGENESIS IN IMMUNOGLOBULIN GENES .3. SOMATIC MUTATIONS IN THE CHICKEN LIGHT-CHAIN LOCUS, Biochimica et biophysica acta, N. Gene structure and expression, 1306(2-3), 1996, pp. 171-178
Citations number
32
Categorie Soggetti
Biology,Biophysics,"Biothechnology & Applied Migrobiology
ISSN journal
01674781
Volume
1306
Issue
2-3
Year of publication
1996
Pages
171 - 178
Database
ISI
SICI code
0167-4781(1996)1306:2-3<171:SHIIG.>2.0.ZU;2-V
Abstract
We report a new approach based on the Monte Carlo method, to analyze g ene conversion. With this, we have examined 235 somatic mutations in t he chicken V-lambda gene and found that about 75% of somatic mutations significantly correlated with donor sequences in 25 pseudo V-lambda g enes (set C) versus about 25% that did not (set N). The RGYW and TAA c onsensus sequences of mutational hotspots were earlier revealed in mam malian V genes. Analysis for correlation between somatic mutations in the V-lambda gene and the consensus sequences showed that the somatic mutations of set N were correlating with the consensus sequences (P(W < W-random) < 0.01) and the somatic mutations of set C were not. Based on further statistical analysis, we suggest that there must be at lea st two mechanisms responsible for somatic hypermutagenesis in the V-La mbda gene: gene conversion and another, which accounts for the elevate d frequencies of somatic mutations at the RGYW and TAA consensus seque nces.