DIFFERENTIAL HYDRATION THERMODYNAMICS OF STEREOISOMERIC DNA-BENZO[A]PYRENE ADDUCTS DERIVED FROM DIOL EPOXIDE ENANTIOMERS WITH DIFFERENT TUMORIGENIC POTENTIALS
La. Marky et al., DIFFERENTIAL HYDRATION THERMODYNAMICS OF STEREOISOMERIC DNA-BENZO[A]PYRENE ADDUCTS DERIVED FROM DIOL EPOXIDE ENANTIOMERS WITH DIFFERENT TUMORIGENIC POTENTIALS, Journal of the American Chemical Society, 118(16), 1996, pp. 3804-3810
A combination of UV spectroscopy, calorimetry, and density techniques
were used to characterize the thermodynamics of complexes with covalen
tly bound hydrophobic pyrenyl residues in the minor groove of DNA unde
camer duplexes. The control duplex d(CCATCGCTACC)/d(GGTAGCGATGG) and
two adduct duplexes in which the chiral (+)-anti-BPDE and (-)-anti-BPD
E (the 7R,8S,9S,10R- and 7S,8R,9R,10S-enantiomers of xy-9t,10t-epoxy-7
,8,9,10-tetrahydrobenzo[a]pyrene) had been reacted covalently with the
exocyclic amino group of the guanine residue G were studied (designa
ted as the (+)- and (-)-BPDE duplexes, respectively). Both of the BPDE
-modified DNA duplexes exhibit lower helix-coil transition temperature
s than the control duplex. The complete thermodynamic profiles (Delta
V, Delta H, Delta G, Delta S, and Delta n(Na+)) for the formation of e
ach duplex were determined at 20 degrees C. Duplex formation is primar
ily enthalpy driven, and is accompanied by an uptake of both counterio
ns and water molecules (negative Delta V). Relative to the unmodified
duplex, the differential thermodynamic profiles of each covalent adduc
t duplex reveal an enthalpy-entropy compensation; the Delta Delta V va
lue is only marginally smaller for the (-)-BPDE-DNA than for the unmod
ified duplex, but the uptake of water is nearly 50% greater for the ()-BPDE duplex. Correlation of the thermodynamic data with the known NM
R solution conformations of the BPDE-DNA complexes (de los Santos et a
l. Biochemistry 1992, 31, 5245) suggests that these differential therm
odynamic parameters, together with the similar values for the uptake o
f counterions, correspond to a differential hydration of the BPDE resi
dues that are exposed to solvent while in the minor groove of B-DNA. T
he formation of the (+)-BPDE duplex results in a greater immobilizatio
n of structural water than in the case of the (-)-BPDE duplex; these r
esults suggest that the bent conformation at the lesion site apparentl
y gives rise to an enhanced exposure of the hydrophobic polycyclic aro
matic moiety of the covalently bound BPDE residue to the aqueous solve
nt.