HEPARINASE-I FROM FLAVOBACTERIUM-HEPARINUM - IDENTIFICATION OF A CRITICAL HISTIDINE RESIDUE ESSENTIAL FOR CATALYSIS AS PROBED BY CHEMICAL MODIFICATION AND SITE-DIRECTED MUTAGENESIS
R. Godavarti et al., HEPARINASE-I FROM FLAVOBACTERIUM-HEPARINUM - IDENTIFICATION OF A CRITICAL HISTIDINE RESIDUE ESSENTIAL FOR CATALYSIS AS PROBED BY CHEMICAL MODIFICATION AND SITE-DIRECTED MUTAGENESIS, Biochemistry, 35(21), 1996, pp. 6846-6852
We recently identified cysteine-135 as an important amino acid for hep
arinase I (EC 4.2.2.7) activity. In this study, we have identified a s
econd residue critical for enzymatic activity. We observe concentratio
n-dependent inactivation of heparinase I in the presence of reversible
histidine-modifying diethyl pyrocarbonate (DEPC); 0.3 mM DEPC results
in 95% of heparinase I inactivation in less than 3 min, and as low as
10 mu M DEPC results in a 85% loss of heparinase I activity in 15 min
. Heparinase I activity is restored following hydroxylamine treatment.
This, along with other experiments, strongly suggests that the inacti
vation of heparinase I by DEPC is specific for histidine residues. Che
mical modification, under nondenaturing conditions, of the histidines
using nonradiolabeled and [C-14]DEPC indicates that between one and tw
o histidine residues are modified. Chemical modification of the surfac
e-accessible histidines, in the presence and absence of heparin, sugge
sts that the histidine(s) lie(s) in or near the active site of heparin
ase I. The wild-type heparinase I has four histidine residues; site-di
rected mutagenesis of H129A, H165A, and H339A did not affect enzyme ac
tivity and the kinetic parameters, suggesting that these residues are
not essential for heparinase I activity. However, H203A inactivates he
parinase I while a H203D mutant has residual activity, indicating a ro
le of this residue in catalysis. We propose that histidine-203, contai
ned in the heparin binding site, is immediately adjacent to cysteine-1
35, and these residues together form the catalytic domain of heparinas
e I.