Ascospores of Neurospora tetrasperma normally contain nuclei of bath m
ating-type idiomorphs (a and A), resulting in self-fertile heterokaryo
ns (a type of sexual reproduction termed pseudohomothallism). Occasion
al homokaryotic self-sterile strains (either a or A) behave as heterot
hallics and, in principle, provide N. tetrasperma with a means for fac
ultative outcrossing. This study was conceived as an investigation of
the population biology of N. tetrasperma to assess levels of intrastra
in heterokaryosis (heterozygosity). The unexpected result was that the
mating-type chromosome and autosomes exhibited very different pattern
s of evolution, apparently because of suppressed recombination between
mating-type chromosomes. Analysis of sequences on the mating-type chr
omosomes of wild-collected self-fertile strains revealed high levels o
f genetic variability between sibling A and a nuclei. In contrast, seq
uences on autosomes of sibling A and a nuclei exhibited nearly complet
e homogeneity. Conservation of distinct haplotype combinations on A an
d a mating-type chromosomes in strains from diverse locations further
suggested an absence of recombination over substantial periods of evol
utionary time. The suppression of recombination on the N. tetrasperma
mating-type chromosome, expected to ensure a high frequency of self fe
rtility, presents an interesting parallel with, and possible model for
studying aspects of, the evolution of mammalian sex chromosomes.