In many plant species, self-incompatibility (SI) is genetically contro
lled by a single multiallelic S locus. Previous analysis of S alleles
in the Solanaceae, in which S locus ribonucleases (S RNases) are respo
nsible for stylar expression of SI, has demonstrated that allelic dive
rsity predated speciation within this family. To understand how alleli
c diversity has evolved, we investigated the molecular basis of gameto
phytic SI in Antirrhinum, a member of the Scrophulariaceae, which is c
losely related to the Solanaceae, We have characterized three Antirrhi
num cDNAs encoding polypeptides homologous to S RNases and shown that
they are encoded by genes at the S locus. RNA in situ hybridization re
vealed that the Antirrhinum S RNases are primarily expressed in the st
ylar transmitting tissue. This expression is consistent with their pro
posed role in arresting the growth of self-pollen tubes. S alleles fro
m the Scrophulariaceae form a separate group from those of the Solanac
eae, indicating that new S alleles have been generated since these fam
ilies separated (similar to 40 million years). We propose that the rec
ruitment of an ancestral RNase gene into SI occurred during an early s
tage of angiosperm evolution and that, since that time, new alleles su
bsequently have arisen at a low rate.