THE WORLD-WIDE DISTRIBUTION OF ALLELE FREQUENCIES AT THE HUMAN DOPAMINE D4 RECEPTOR LOCUS

Citation
Fm. Chang et al., THE WORLD-WIDE DISTRIBUTION OF ALLELE FREQUENCIES AT THE HUMAN DOPAMINE D4 RECEPTOR LOCUS, Human genetics, 98(1), 1996, pp. 91-101
Citations number
55
Categorie Soggetti
Genetics & Heredity
Journal title
ISSN journal
03406717
Volume
98
Issue
1
Year of publication
1996
Pages
91 - 101
Database
ISI
SICI code
0340-6717(1996)98:1<91:TWDOAF>2.0.ZU;2-W
Abstract
The dopamine D4 receptor gene (DRD4) has an expressed polymorphism in the third exon that may have functional relevance. The polymorphism ex ists at two levels. At the higher level there is an imperfect tandem r epeat of 48 base pairs (bp) coding for 16 amino acids; alleles have be en identified with 2 (32 amino acids) to 10 (160 amino acids) repeats. The imperfect nature of the repeats is responsible for a more subtle level of variation since alleles with the same number of repeats can d iffer in the exact sequences or in the order of the variants of the 48 -bp unit. We have undertaken a global survey of this expressed polymor phism as one approach to understanding the evolutionary significance a nd origins of the polymorphism as well as understanding what selective forces, if any, may be operating at this locus. As the first step, we have determined the repeat number genotype of the DRD4 repeat polymor phism in 1,327 individuals from 36 different populations. The allele f requencies differ considerably among the different populations. The 4- repeat allele was the most prevalent (global mean allele frequency = 6 4.3%) and appeared in every population with a frequency ranging from 0 .16 to 0.96. The 7-repeat allele was the second most common (global me an = 20.6%), appearing quite frequently in the Americas (mean frequenc y = 48.3%) but only occasionally in East and South Asia (mean frequenc y = 1.9%). The 2-repeat allele was the third most common (global mean frequency = 8.2%) and was quite frequent in East and South Asia (mean frequency = 18.1%) while uncommon in the Americas (mean frequency = 2. 9%) and Africa (mean frequency = 1.7%). The universality of the polymo rphism with only three common repeat-number alleles (4, 7, and 2) indi cates that the polymorphism is ancient and arose before the global dis persion of modern humans. The diversity of actual allele frequencies f or this expressed polymorphism among different populations emphasizes the importance of population considerations in the design and interpre tation of any association studies carried out with this polymorphism.