A range of molecular methods is available for detecting specific compo
nents of pathogens in plant material. Of these, the detection of antig
enic proteins by immunological methods is rapid and inexpensive. The d
etection of genome components by nucleic acid based technologies, alth
ough more complex, is approaching the simplicity of immunological meth
ods with the advantage of greater sensitivity and specificity. The lat
ter techniques are suitable for most pathogens, but are particularly r
elevant for non-immunogenic pathogens, such as viroids, and for applic
ations where sensitivity of detection must be at least as high as Ibr
current biological diagnoses, such as in quarantine situations. Nuclei
c acid component analysis can also be used for investigations of disea
ses of unknown etiology. In an overview, available techniques relevant
to plant pathology are briefly described and compared.