Phylogenetic relationships within a group of budding purple nonsulfur
bacteria of the genus Rhodopseudomonas were studied by DNA-DNA hybridi
zation. Most of the strains were new isolates from natural environment
s with a wide range of physicochemical conditions. A total of 32 strai
ns were analyzed, including the type strains of Rhodopseudomonas palus
tris, Rps. rutila, Rps. marina, and Rps. acidophila. Nine phylogenetic
ally remote clusters were revealed, showing an average DNA-DNA homolog
y of 15%. One of the clusters contained the type strain of Rps. marina
, isolated from marine habitats, and two new isolates from hot freshwa
ter springs. These new isolates turned out to be facultative halophile
s with a salinity optimum of 1-3% and were assigned to Rps. marina on
the basis of their phenotypic characteristics and DNA-DNA homology of
60% with the type strain of this species. The type strain of Rps. acid
ophila was not specifically related to any other strain used during th
is investigation. The remaining 26 isolates and the type strains of Rp
s. palustris and Rps. rutila were very similar phenotypically, but for
med seven phylogenetically remote clusters including 13 genospecies; n
one of the new isolates were closely related to the type strains of Rp
s. palustris and Rps. rutila, which also proved to be phylogenetically
distinct. Thus, the Rps. palustris-like bacteria, which are widesprea
d in nature and comprise phenotypically a homogeneous group, appear to
be phylogenetically diverse. The prospects for developing a classific
ation system for these budding purple nonsulfur bacteria that would be
in agreement with their phylogenetic relationships are discussed. Pos
sible correlation between the phylogenetic relationships of these bact
eria and the ecological peculiarities of their natural habitats is als
o considered.