Micro-FISH was used to elucidate the chromosomal origin of marker chro
mosomes in three patients. Ten copies of marker chromosomes were colle
cted with microneedles from GTG banded metaphases, transferred to a co
llecting drop and amplified by means of DOP-PCR. The PCR products were
labeled with biotin-l4-dATP and used as FISH probes for hybridization
to normal metaphase chromosomes and to metaphase chromosomes of the p
atients (reverse painting). With the generation of chromosome region-s
pecific painting probes by PCR amplification of microdissected DNA and
subsequent FISH it was possible to identify the marker chromosomes in
all patients. One marker appeared to be derived from the centromere r
egion of the X-chromosome and the proximal third of the long arm, one
from the centromere region of chromosome 17 and one marker chromosome
was identified as an isochromosome 18p.