RFLP VARIATION AND GENETIC-RELATIONSHIPS IN CULTIVATED CUCUMBER

Citation
A. Dijkhuizen et al., RFLP VARIATION AND GENETIC-RELATIONSHIPS IN CULTIVATED CUCUMBER, Euphytica, 90(1), 1996, pp. 79-87
Citations number
36
Categorie Soggetti
Plant Sciences",Agriculture
Journal title
ISSN journal
00142336
Volume
90
Issue
1
Year of publication
1996
Pages
79 - 87
Database
ISI
SICI code
0014-2336(1996)90:1<79:RVAGIC>2.0.ZU;2-1
Abstract
Two sets of cucumber (Cucumis sativus L.) germplasm were used to deter mine the potential use of restriction fragment length polymorphisms (R FLPs) for estimating genetic relationships. Sixteen accessions [15 dom esticated variety sativus and one feral variety hardwickii (PI 183967) ] of diverse origin were used to assess RFLP variation in cucumber, an d to determine if genetic relationships based on RFLPs were similar to those obtained by isozyme analysis. Additionally, 35 commercial lines or cultivars were surveyed to determine genetic relationships among a nd within common cucumber types (narrow genetic base). The 16 accessio ns were surveyed with 440 low copy clones from two libraries (Pst I pa rtial genomic and cDNA) using two restriction enzymes. Data from a sub set of 104 random (mapped and unmapped) and a set of 30 mapped RFLPs w ere used to estimate genetic relationships among the 16 cultigens. Var iability was low among RFLPs (33% of all probes) and putative alleles (similar to 2.2 polymorphic fragments/probe). RFLP variation between s ativus lines and hardwickii (21 +/- 4%) was greater than among sativus lines (12 +/- 2 %). RFLPs among the 16 accessions revealed genetic re lationships which agree with those obtained using isozymes. Genetic re lationships estimated using mapped and unmapped RFLPs were similar. Th e 35 elite lines were surveyed using a set of 40 RFLPs from 3 librarie s (Pst I and EcoR I partial genomic and cDNA) to evaluate the discrimi natory value of RFLPs among and between commercial cucumber types. The RFLP-derived genetic relationships among this germplasm were in agree ment with predictions based on fruit type and pedigree information. Th us, RFLPs are a useful addition to the morphological characters and is ozyme loci currently used for taxonomic classification and plant varie ty protection of cucumber.