U. Arnason et al., THE PHOCA STANDARD - AN EXTERNAL MOLECULAR REFERENCE FOR CALIBRATING RECENT EVOLUTIONARY DIVERGENCES, Journal of molecular evolution, 43(1), 1996, pp. 41-45
Comparison of the complete mitochondrial DNA (mtDNA) of the high-Arcti
c ringed seal (Phoca hispida) and the sub-Arctic harbour (P. vitulina)
and grey (Halichoerus grypus) seals shows that they are genetically e
quidistant from one another. We relate the evolutionary divergence of
the three species to expanding glaciation in the Arctic Basin and esta
blish, in conjunction with mtDNA data, a standard reference for calibr
ation of recent divergence events among mammalian taxa. In the present
study, we apply the ''Phoca standard'' to the dating of divergences w
ithin the hominid phylogenetic tree. After determining the relative ra
tes of substitution over all mitochondrial protein-coding genes in the
different evolutionary lineages, we estimate that humans and chimpanz
ees diverged from each other 6.1 Mya (95% confidence limits: 5.2-6.9 M
ya). The corresponding lower-limit divergence between common chimpanze
e, Pan troglodytes, and pygmy chimpanzee, P. paniscus, occurred 3 (2.4
-3.6) Mya, and the primary split within the P. troglodytes complex 1.6
(1.3-2.0) Mya. The analyses suggest that the split between Gorilla an
d Pan/Homo occurred 8.4 (7.3-9.4) Mya. They also suggest that Pongo (o
rangutan) and the lineage leading to gorillas, chimpanzees, and humans
diverged 18.1 (16.5-19.6) Mya. The present analysis is independent of
the hominid paleontological record and inferential morphological inte
rpretations and thus is a novel approach to the lower-limit dating of
recent divergences.