Diagnostic techniques, routinely used in clinical practice for monitor
ing acute leukemia patients, are able to detect only 1-5% of malignant
cells. At present, two main techniques are being introduced for detec
tion of minimal residual disease (MRD) in leukemia, namely immunologic
al marker analysis and the polymerase chain reaction (PCR) technique w
ith general sensitivity of 10(-4)-10(-5). Immunological marker analysi
s allows detection of unusual and aberrant immunophenotypes, and is us
ually performed by flow cytometry. PCR analysis allows detection of le
ukemia-specific DNA sequences, such as fusion regions of chromosome as
berrations and junctional regions of rearranged immunoglogulin (Ig) ge
nes and T-cell receptor (TcR) genes. The applicability of the immunoph
enotyping and PCR-mediated MRD techniques is dependent on the type of
leukemia. In virtually all acute lymphoblastic leukemias, PCR analysis
of 18 and TcR genes can be used, and immunophenotypic MRD detection i
s also possible in 70-80% of cases. In AML, immunophenotypic MRD detec
tion can be applied in approximately 80% of cases and PCR analysis of
chromosome aberrations in 25-40%. Each MRD technique has its advantage
s and limitations, which have to be weighed carefully to make an appro
priate choice. Furthermore, standardization of the MRD techniques is n
eeded before they are used for stratification or adaptation of treatme
nt protocols. Finally, the clinical impact of MRD detection for the va
rious subtypes of acute leukemias has to be established.