Kalman filler theory and autoregressive time series are used to map se
a level height anomalies in the tropical Pacific. Our Kalman filters a
re implemented with a linear state space model consisting of evolution
equations for the amplitudes of baroclinic Kelvin and Rossby waves an
d data from the Pacific tide gauge network. Ln this study, three versi
ons of the Kalman filter are evaluated through examination of the inno
vation sequences, that is, the time series of differences between the
observations and the model predictions before updating. In a properly
tuned Kalman filter, one expects the innovation sequence to be white (
uncorrelated, with zero mean). A white innovation sequence can thus be
taken as an indication that there is no further information to be ext
racted from the sequence of observations. This is the basis for the fr
equent use of whiteness, that is, lack of autocorrelation, in the inno
vation sequence as a performance diagnostic for the Kalman filter. Our
long-wave model embodies the conceptual basis of current understandin
g of the large-scale behavior of the tropical ocean. When the Kalman f
ilter was used to assimilate sea level anomaly data, we found the resu
lting innovation sequence to be temporally correlated, that is, nonwhi
te and well fitted by an autoregressive process with a lag of one mont
h. A simple modification of the way in which sea level height anomaly
is represented in terms of the state vector for comparison to observat
ion results in a slight reduction in the temporal correlation of the i
nnovation sequences and closer fits of the model to the observations,
but significant autoregressive structure remains in the innovation seq
uence. This autoregressive structure represents either a deficiency in
the model or some source of inconsistency in the data. When an explic
it first-order autoregressive model of the innovation sequence is inco
rporated into the filter, the new innovation sequence is white. In an
experiment with the modified filter in which some data were held back
from the assimilation process, the sequences of residuals at the withh
eld stations were also white. To our knowledge, this has not been achi
eved before in an ocean data assimilation scheme with real data. Impli
cations of our results for improved estimates of model error statistic
s and evaluation of adequacy of models are discussed in detail.