Rd. Cramer et al., BIOISOSTERISM AS A MOLECULAR DIVERSITY DESCRIPTOR - STERIC FIELDS OF SINGLE TOPOMERIC CONFORMERS, Journal of medicinal chemistry, 39(16), 1996, pp. 3060-3069
The comparative molecular field analysis steric field of a single ''to
pomeric'' conformer is introduced as a molecular diversity descriptor
particularly useful for combinatorial chemistry involving variations a
round a fixed ''core''. Using this new descriptor, 736 commercially av
ailable thiols are divided into 231 bioisosteric clusters, whose compo
sitions agree at least as well with medicinal chemical experience and
intuition as do clusters derived from Tanimoto differences between 2D
fragment occurrences. However, in practice topomeric steric fields com
plement 2D fingerprints, being the two most frequently useful descript
ors yet found for neighborhood-based design of combinatorial libraries
.