A. Kontrogiannikonstantopoulos et al., A NOVEL SEA-URCHIN NUCLEAR RECEPTOR ENCODED BY ALTERNATIVELY SPLICED MATERNAL RNAS, Developmental biology, 177(2), 1996, pp. 371-382
Screening of a genomic library from the sea urchin Strongylocentrotus
purpuratus with a human COUP-TF I cDNA probe revealed the presence of
a novel gene member of the steroid-thyroid-retinoic acid receptor supe
rfamily, which was named SpSHR2 (S. purpuratus Steroid Hormone Recepto
r 2). Sequence analysis of the isolated genomic clone revealed that th
e DNA binding domain of this orphan receptor is most homologous to the
human TR2 receptor. Using this sea urchin genomic fragment as probe,
a S. purpuratus embryonic cDNA library was screened and two distinct b
ut homologous cDNA clones were isolated. The two cDNAs encode the same
DNA binding domain as the SpSHR2 gene and carry an almost identical 3
'-untranslated sequence. One of the clones, however, is missing an ent
ire region of about 1100 nt which includes the putative ligand binding
domain. Genomic DNA hybridization suggests that SpSHR2 is a single-co
py gene in the S. purpuratus genome. Exon skipping during splicing of
a single primary transcript appears to be the reason for the different
ly sized mRNAs. RNA blot hybridization results suggest that SpSHR2 tra
nscripts are stored as maternal RNA in the egg and are not detected be
yond the blastula stage. In vitro transcription and translation of the
full-length cDNA produced a polypeptide which specifically binds to t
he hormone response element in the 5'-flanking region of the sea urchi
n actin CyIIIb gene. In vivo labeling of proteins synthesized by cleav
age stage embryos followed by immune precipitation of the SpSHR2 prote
in using specific antibodies reveals that the maternal SpSHR2 mRNA is
being translated during early embryonic development. (C) 1996 Academic
Press, Inc.