LAMBDA-DYNAMICS - A NEW APPROACH TO FREE-ENERGY CALCULATIONS

Authors
Citation
Xj. Kong et Cl. Brooks, LAMBDA-DYNAMICS - A NEW APPROACH TO FREE-ENERGY CALCULATIONS, The Journal of chemical physics, 105(6), 1996, pp. 2414-2423
Citations number
50
Categorie Soggetti
Physics, Atomic, Molecular & Chemical
ISSN journal
00219606
Volume
105
Issue
6
Year of publication
1996
Pages
2414 - 2423
Database
ISI
SICI code
0021-9606(1996)105:6<2414:L-ANAT>2.0.ZU;2-B
Abstract
We present a novel and efficient method for performing free energy cal culations. Treating the conventional lambda variables associated with the ''progress'' in the chemical coordinates dynamically, our approach transforms free energy calculations into calculating potentials of me an force in the lambda-space with molecular dynamics. This extended Ha miltonian formalism utilizes the full power of umbrella sampling techn iques and the weighted histogram analysis method. Applications to free energies of hydration and a model illustrating competitive binding ca lculations are presented. These calculations demonstrate the robustnes s and flexibility of the new lambda-dynamics approach. (C) 1996 Americ an Institute of Physics.