O. Casher et al., ADVANCED VRML BASED CHEMISTRY APPLICATIONS - A 3D MOLECULAR HYPERGLOSSARY, Journal of molecular structure. Theochem, 368, 1996, pp. 49-55
A test bed for what we have termed a ''3D molecular hyperglossary'' ha
s been developed. This is illustrated with the results of a three-dime
nsional search of the Cambridge Structural Database for intermolecular
interactions between chlorinated aryl hydrogen atoms and oxygen centr
es. The results have been represented as a scatter diagram of points a
bout a well defined molecular centre, and encoded in Virtual Reality M
odelling Language (VRML) to enable the user to interrogate what amount
s to a three-dimensional hyperglossary index using a VRML browser. Ind
ividual regions of the molecular hyperglossary can be inspected by act
ivating hyperlinks contained within the VRML descriptors. These hyperl
inks point to three-dimensional VRML encoded diagrams that were automa
tically generated from the original crystallographic coordinates. The
individual molecular diagrams can in turn contain hyperlinks to other
relevant information about the molecule, such as links to electronic j
ournal articles or conferences, and other electronic documentation. Th
e implications for use in electronic journals and conferences are disc
ussed.