The patterns of gene expression in the Drosophila brain were studied b
y using the lacZ reporter gene carried on an enhancer detector element
. From the analysis of serial sections fo the heads of 6000 enhancer d
etector lines, reporter gene expression in some lines was found to gen
erally follow boundaries established by cell type or anatomy, revealin
g distinct patterns of lacZ expression restricted to the lamina, the m
edulla, mushroom bodies, antennal lobes, or other anatomical subdivisi
ons. About 15% of the lines showed ubiquitous expression in most or al
l head tissues and 25% of the lines showed expression throughout the C
NA. Another quarter of the lines showed widespread expression in the C
NA, with large regions of the brain showing expression. This suggests
that the majority of detected genes are expressed with little spatial
specificity. The expression patterns produced by 12 different insertio
ns at the rutabaga locus were found to be extremely similar in the bra
in and offer strong evidence that the enhancer detector elements gener
ally report the activity oa an adjacent gene. Only 15% of the lines we
re judged to have relatively specific expression in one brain region,
including those with preferential or specific expression in the mushro
om bodies, antennal lobes, lamina, medulla, etc. The cytological inser
tion sites for elements showing preferential mushroom body expression
were found to be dispersed in the genome at approximately 50 different
chromosomal regions. In addition to providing a broad picture of the
transcriptional activity in the Drosophila brain, these enhancer detec
tor lines offer access to interesting new genes and form a novel colle
ction of lines in which identifiable brain cells are marked in a repro
ducible way. (C) 1996 John Wiley & Sons, Inc.