Mono(6-succinylamido-6-deoxy)-beta-cyclodex was synthesized by classic
al carbohydrate chemistry and used as a template mono-functionalized w
ith the Linear, fully flexible 4C-spacer carboxylate for covalent link
age of the calpain inhibitor leucyl-leucyl-norleucinal. Spectroscopic
analyses of the conjugate do not support a self-inclusion of part of t
he hydrophobic peptide tail, but confirm its intra- or intermolecular
interaction with the template moiety that leads to full water solubili
ty. The inhibitory potency of the beta-cyclodextrin/peptide aldehyde c
onstruct was compared with that of the parent Ac-Leu-Leu-Me-H against
cathepsin B and calpain, Despite the large size of the template the in
hibition of cathepsin B was only slightly reduced in full agreement wi
th the X-ray structure of this enzyme which shows full accessibility o
f the S-subsites, For this enzyme the 4C-spacer is apparently sufficie
nt to guarantee optimal interaction of the peptide tail with the bindi
ng cleft. Conversely, for mu-calpain a significantly decreased inhibit
ory potency was obtained with the conjugate suggesting steric interfer
ence of the template in the binding process, These results show that t
he beneficial properties of the cyclodextrin template can be retained
in conjugates with bioactive peptides if attention is paid to optimize
in each case the size and nature of the spacer for optimal recognitio
n of the grafted biomolecule.