We have performed a 800 ps molecular dynamics simulation of bovine pan
creatic trypsin inhibitor (BPTI) in water coupled to a pressure bath a
t 1, 10,000, 15,000, and 20,000 bar. The simulation reproduces quite w
ell the experimental behavior of the protein under high pressure, The
protein keeps its globular form, but adopts a different conformation w
ith a very small reduction in volume. Some residues in the hydrophobic
core become exposed to water and a large part of the secondary struct
ure of the protein, (60% of the sheet structure and 40% of the helical
structure) is denatured between 10 and 15 kbar, This is in good agree
ment with experimental data (Goossens, K., et al. fur. J. Biochem, 236
:254-262, 1996) that show denaturation of BPTI between 8 and 14 kbar.
A further increase of the pressure results in a freezing of the protei
n as deduced from the large decrease of the mobility of the residues.
During the simulation, the normal structure of water changes from an i
ce Ih-like to an ice VI-like structure, while keeping the liquid state
, The driving force of the high pressure induced conformational transi
tion seems be the higher compressibility of the water compared with th
e protein. This produces a change in the solvent properties and leads
to penetration of the solvent into the hydrophobic core. (C) 1996 Wile
y-Liss, Inc.