The Drosophila sex determination gene Sex-lethal controls its own expr
ession and the expression of downstream target genes such as transform
er by regulating RNA splicing. Genetic and molecular studies have esta
blished that Sri requires the product of another gene, snf, to autoreg
ulate the splicing of its own transcripts. snf has recently been shown
to encode a Drosophila U1 and U2 small nuclear ribonucleoprotein part
icle protein, In the work reported here, we demonstrate that the Sri a
nd Snf proteins can interact directly in vitro and that these two prot
eins are part of an RNase-sensitive complex in vivo which can be immun
oprecipitated with the Sri antibody. Unlike bulk Snf protein, which se
diments slowly in sucrose gradients, the Snf protein associated with S
ri is in a large, rapidly sedimenting complex. Detailed characterizati
on of the Sxl-Snf complexes from cross-linked extracts indicates that
these complexes contain additional small nuclear ribonucleoprotein par
ticle proteins and the U1 and U2 small nuclear RNAs. Finally, consiste
nt with the RNase sensitivity of the Sxl-Snf complexes, Sri transcript
s can also be immunoprecipitated by Sri antibodies. On the basis of th
e physical interactions between Sri and Snf, we present a model for Sr
i splicing regulation. This model helps explain how the Sri protein is
able to promote the sex-specific splicing of Sri transcripts, utilizi
ng target sequences that are distant from the regulated splice sites.