IDENTIFICATION OF ACTIVE-SITE RESIDUES ESSENTIAL TO 4-CHLOROBENZOYL-COENZYME-A DEHALOGENASE CATALYSIS BY CHEMICAL MODIFICATION AND SITE-DIRECTED MUTAGENESIS
Ga. Yang et al., IDENTIFICATION OF ACTIVE-SITE RESIDUES ESSENTIAL TO 4-CHLOROBENZOYL-COENZYME-A DEHALOGENASE CATALYSIS BY CHEMICAL MODIFICATION AND SITE-DIRECTED MUTAGENESIS, Biochemistry, 35(33), 1996, pp. 10879-10885
4-Chlorobenzoyl-coenzyme A (4-CBA-CoA) dehalogenase catalyzes the hydr
olysis of 4-CBA-CoA to 4-hydroxybenzoyl-coenzyme A (4-HBA-CoA) via a n
ucleophilic aromatic substitution pathway involving the participation
of an active site carboxylate side chain in covalent catalysis. In thi
s paper we report on the identification of conserved aspartate, histid
ine, and tryptophan residues essential to 4-CBA-CoA catalysis using ch
emical modification and site-directed mutagenesis techniques. Treatmen
t of the dehalogenase with diethyl pyrocarbonate resulted in complete
loss of catalytic activity (k(inact) = 0.17 mM(-1) min(-1) at pH 6.5,
25 degrees C) that was fully regained by subsequent treatment with hyd
roxylamine. The protection from inactivation afforded by enzyme bound
4-HBA-CoA indicated that the essential histidine residues are located
at the active site. Replacement of conserved histidine residues 81, 90
, 94, and 208 with glutamine residues resulted in a significant loss o
f catalytic activity only in the cases of the histidine 81 and 90 muta
nts. Substrate and product ligand binding studies showed that binding
is not significantly inhibited in these mutants. Site directed mutagen
esis of a selection of conserved aspartate and glutamate residues, ide
ntified aspartate 145 as being essential to dehalogenase catalysis. Li
gand binding studies showed that this residue is not required for tigh
t substrate/product binding. Chemical modification of the dehalogenase
with N-bromosuccinimide resulted in full loss of catalytic activity t
hat was prevented by saturation of the active site with product ligand
, providing evidence favoring an essential active site tryptophan. Phe
nylalanine replacement of conserved tryptophan residues 179 and 137 re
duced catalytic activity only in the latter (k(cat) = 0.03% of wild-ty
pe dehalogenase). On the basis of these results and the recently deter
mined X-ray crystal structure of the complex of 4-CBA-CoA dehalogenase
and 4-HBA-CoA [Benning, M. M., Taylor, K. L., Liu, R.-Q., Yang, G., X
iang, H., Wesenberg, G., Dunaway-Mariano, D., Holden, H. M. (1996) Bio
chemistry 35, 8103-8109] we propose that aspartate 145 functions as th
e active site nucleophile, that tryptophan 137 serves as a hydrogen bo
nd donor to the aspartate 145 C=O, and that histidine 90 serves to dep
rotonate the bound H2O molecule.