Using a PCR-based screen to identify tyrosine kinases involved in T ce
ll development, we have cloned a new member of the Eph-family of recep
tor tyrosine kinases (Mep, for murine eph-family protein). At the amin
o acid level Mep is 60% identical to the chicken embyronic kinase Cek9
. Sequence analysis indicates that the predicted extracellular portion
of Mep bears an Ig-like domain, a cysteine-rich region, and sequences
homologous to fibronectin type III. The transmembrane region of Mep i
s followed by a kinase domain. Surprisingly, this kinase domain carrie
s amino acid substitutions in the highly conserved consensus motifs fo
und in all protein tyrosine kinases and known to be crucial for kinase
activity. We demonstrate that a bacterial fusion protein of the Mep k
inase domain does not have protein tyrosine kinase activity. Analysis
of Mep mRNA levels in a variety of mouse tissues shows that Mep is hig
hly expressed in thymus and brain. We have also isolated two additiona
l Mep cDNA clones from thymocytes which are predicted to encode secret
ed forms of the Mep extracellular domain; mRNAs encoding these secrete
d isoforms are also expressed in mouse brain.