A novel estrogen receptor (hereinafter referred to as ER beta) was clo
ned using degenerate PCR primers, A comparison of the amino acid seque
nce of ER beta with the 'classical' ER (ER alpha) shows a high degree
of conservation of the DNA-binding domain (96%), and of the ligand-bin
ding domain (58%), In contrast, the A/B domain, the hinge region and t
he F-domain are not conserved. Northern blot analysis revealed that ER
beta is expressed in human thymus, spleen, ovary and testis, Transien
t transfections of an ER beta expression construct together with an ER
E-based reporter construct in CHO cells clearly demonstrated transacti
vation of ER beta by 17 beta-estradiol. In addition, the ER alpha anta
gonist ICI-164384 is a potent antagonist for ER beta as well, Interest
ingly, the level of transactivation by 17 beta-estradiol is higher for
ER alpha than for ER beta, which may reflect suboptimal conditions fo
r ER beta at the level of the ligand, responsive element or cellular c
ontext.