The kinesin motor proteins translocate toward either the plus or minus
end of microtubules (MTs). Competitive microtubule binding assays wer
e carried out with monomeric motor domains of the minus-end-directed n
onclaret disjunctional (Ncd) and Kar3 and the plus-end-directed kinesi
n heavy chain (KHC) to determine whether motors of the same or opposit
e polarity compete for binding sites on MTs and to test the idea that
motor polarity is determined by differences in binding sites on MTs of
the motors. The stoichiometries of binding were approximately 1 motor
: 1 tubulin heterodimer for all three motors. Ncd and Kar3, both minus
-end motors, severely inhibited the binding of one another to MTs, as
predicted theoretically for binding of the two motors to the same site
on MTs, indicating that the binding sites on MTs of Ncd and Kar3 are
the same or overlap extensively. Motors of opposite polarity, KHC and
Ncd or KHC and Kar3, showed partial or complete inhibition of binding
to MTs under different experimental protocols. The differences in bind
ing behavior could be due to experimental conditions or be inherent in
the nature of motor binding to MTs. Alternatively, differences in KHC
and Ncd or Kar3 binding sites on MTs may exist such that the motors b
ind to partially overlapping but nonidentical sites on MTs. These diff
erences in binding sites may be related to the opposite polarity of tr
anslocation on MTs of the motors.