Topoisomerases are enzymes that catalyse the transient breakage and re
joining of either one (topo I) or two (topo II) DNA strands, to allow
one strand to pass through another and prevent unresolvable tangles du
ring processes such as DNA replication. A number of important clinical
antitumour agents act through inhibition of topo II enzymes, while so
me topo I inhibitors appear likely to enter clinical use. Although the
se chemicals do not covalently interact with DNA, they have strong mut
agenic potential, generally causing events at the level of the chromos
ome rather than that of the gene. Most are recombinogens, may affect g
ene expression and can also lead to aneuploidy through effects on chro
mosome segregation. Most topo I and topo II inhibitors primarily cause
mutagenic events associated with the replication fork. However, at le
ast in mitotic chromosomes, topo II enzymes are located at the base of
chromosome loops, and topo II inhibitors may facilitate subunit excha
nges, leading to major deletions and illegitimate recombinational even
ts. There is evidence that programmed cell death provides an alternati
ve pathway to mutagenesis following treatment by either topo I or topo
II inhibitors. The final fate of the cell will result from a balance
between these two processes.