P. Berthault et al., SOLUTION STRUCTURE OF A LEWIS(X) ANALOG BY OFF-RESONANCE H-1-NMR SPECTROSCOPY WITHOUT USE OF AN INTERNAL DISTANCE REFERENCE, Journal of biomolecular NMR, 8(1), 1996, pp. 23-35
A recent H-1 NMR method has been applied to the determination of the s
olution structure and internal dynamics of a synthetic mixed C/O trisa
ccharide related to sialyl Lewis(x). Varying the rf field offset in RO
ESY-type experiments enabled the measurement of longitudinal and trans
verse dipolar cross-relaxation rates with high accuracy. Assuming that
for each proton pair the motion could be represented by a single expo
nential autocorrelation function, it was possible to derive geometrica
l parameters (r) and dynamic parameters (tau(cp)). With this assumptio
n, 224 cross-relaxation rates have been transformed into 30 interproto
n distance constraints and 30 dipolar correlation times. The distance
constraints have been used in a simulated-annealing procedure. This tr
isaccharide exhibits a structure close to the O-glycosidic analogue, b
ut its flexibility seems highly reduced. On the basis of the determine
d structure and dy namics, it is shown that no conformational exchange
occurs, the molecule existing in the form of a unique family in aqueo
us solution. In order to assess the quality of the resulting structure
s and to validate this new experimental procedure of distance extracti
on, we finally compare these solution structures to the ones obtained
using three different sets of distances deduced from three choices of
internal reference. It appears that this procedure allows the determin
ation of the most precise and accurate solution.