HIGH-RESOLUTION SOLUTION STRUCTURE OF 2 MEMBERS OF A CONFORMATIONALLYHOMOGENEOUS COMBINATORIAL PEPTIDE LIBRARY BASED ON THE CLASSICAL ZINC-FINGER MOTIF
G. Barbato et al., HIGH-RESOLUTION SOLUTION STRUCTURE OF 2 MEMBERS OF A CONFORMATIONALLYHOMOGENEOUS COMBINATORIAL PEPTIDE LIBRARY BASED ON THE CLASSICAL ZINC-FINGER MOTIF, Journal of biomolecular NMR, 8(1), 1996, pp. 36-48
We describe the high-resolution structure by NMR of two peptides that
belong to a combinatorial library based on the zinc-finger motif. The
library represents, to the best of our knowledge, the first example of
a conformationally homogeneous peptide library and was obtained by in
troducing random residues in five positions of the or-helical portion
of a 26-residue 'consensus' peptide (CPI) belonging to the Cys(2)-Hys(
2) zinc-finger family. The result was shown to be a highly hom (Bianch
i et al., 1995). The structures of the parent compound (CPI) and of a
representative member (CPlm) that was selected by screening the librar
y with a monoclonal antibody are compared in detail as an example of t
he very high stability of the zinc-finger scaffold upon sequence varia
bility. The two peptides exhibit an extremely high degree of structura
l similarity. The use of this type of conformationally constrained com
binatorial library might represent a step forward in the design of pep
tidomimetics, as it considerably accelerates the process of the identi
fication of the spatial relationship among the pharmacophoric groups.