6 NEWLY IDENTIFIED HLA-DRB ALLELES - DRB1-ASTERISK-1121, DRB1-ASTERISK-1419, DRB1-ASTERISK-1420, DRB1-ASTERISK-1421, DRB3-ASTERISK-0203 ANDDRB5-ASTERISK-0103

Citation
W. Verduyn et al., 6 NEWLY IDENTIFIED HLA-DRB ALLELES - DRB1-ASTERISK-1121, DRB1-ASTERISK-1419, DRB1-ASTERISK-1420, DRB1-ASTERISK-1421, DRB3-ASTERISK-0203 ANDDRB5-ASTERISK-0103, Tissue antigens, 48(2), 1996, pp. 80-86
Citations number
15
Categorie Soggetti
Immunology,"Cell Biology
Journal title
ISSN journal
00012815
Volume
48
Issue
2
Year of publication
1996
Pages
80 - 86
Database
ISI
SICI code
0001-2815(1996)48:2<80:6NIHA->2.0.ZU;2-P
Abstract
Seven samples with irregular PCR-SSO hybridization patterns, observed during routine HLA-DRB typing, were studied in more detail. Group-spec ific amplification, followed by hybridization with relevant SSOs stren gthened the suggestion that these samples contained new DRB alleles. D RB exon 2 segments were amplified, cloned and sequenced and revealed: DRB11121 [MUL] is similar to DRB1*1102 in which codon 85 changed from GTT(V) into GTC(A); DRB11419 [AKKAL] is similar to DRB1*1402 with co don 71 changed from AGG(R) into AAG(K); DRB11420 [OND-52971] is a DRB 11406 with codon 37 changed from AAC(N) into TTC(F); DRB1*1421 [TGI] is similar to DRB11417 with codon 71 changed from AGG(R) into AAG(K); DRB30203 [POS] is similar to DRB3*0202 in which codons 37-38 are cha nged from TAC GCG(YA) into TCC GTC(SV); DRB50103 was found in two unr elated individuals of Oriental origin [IND-24 and IND-59] and is simil ar to DRB50102 in which codon 71 AGG(R) changed into ACG(T). This par ticular sequence variation at position 71 has not yet been described. The new DRB sequences were confirmed using the sequencing based typing technique. Low resolution PCR-SSP typing failed to amplify two of the DRB114 variants, whereas high resolution PCR-SSP resulted in aberran t I rant patterns. Class II alloantisera identify the codon 71 changes in DRB11419 and *1421 with respect to the MC1('DR1+DR4') epitope.