In order to clarify the phylogenetic relationships in A-genome species
of rice, RAPD analysis was carried out using 29 accessions (8 Oryza s
ativa, 6 O. glaberrima, 13 O. perennis, and 2 O. breviligulata). Their
total DNA was used as template for PCR with 14 decamer primers. The a
mplified products were electrophoresed in agarose gel, and the banding
patterns were observed. Average number of total amplified bands for e
ach accession using 14 primers was 84.6. By comparing the banding patt
erns, the proportion of common bands between 29 accessions was calcula
ted and a dendrogram showing genetic relationships was constructed. Mo
st of the accessions formed clusters corresponding to their taxonomic
grouping. The Oceanian and African forms of O. perennis were substanti
ally different from all other groups. The Asian form of O. perennis, h
owever, formed a complex with O. sativa while O. breviligulata was clu
stered with O. glaberrima. This indicates that O. sativa and O. glaber
rima have probably originated from the Asian form of O. perennis and f
rom O. breviligulata, respectively.