The Usher syndromes are a group of autosomal recessive disorders chara
cterised by retinitis pigmentosa (RP) with congenital, stable (non-pro
gressive) sensorineural hearing loss. Profound deafness, RP, and no ve
stibular responses are features of Usher type I, whereas moderate to s
evere hearing loss and RP with normal vestibular function describe Ush
er type II. The gene responsible for most cases of Usher II, USH2a, is
on chromosome 1q41; at least one other Usher II gene (as yet unlinked
) is known to exist. Usher III presents with a progressive hearing los
s that can mimic the audiometric profile seen in Usher II. A gene caus
ing Usher III in a group of Finnish families, USH3, resides on chromos
ome 3q. Since the phenotypes for Usher II and III overlap, it is impor
tant to determine how frequently Usher IIa, Usher IIb, and Usher III o
ccur in a clinical population of non-Usher I patients. DNA was collect
ed from 29 Dutch families and genotyped with six DNA markers known to
flank the USH2a gene closely, and with five markers that flank USH3. R
esults of haplotype and linkage analysis were consistent with linkage
to the USH2a locus in 26 of these 29 Dutch families. Three families di
splayed no linkage to 1q41 markers, and one of these three families ap
peared unlinked to 3q markers as well; current haplotypes of the other
two families are inconclusive for Linkage with the USH3 locus without
further genotyping. While an A test for heterogeneity of USH2a was st
atistically significant, no convincing evidence of linkage to USH3 was
found in this Dutch sample. Consequently, the frequency of the unlink
ed variety of Usher IIa (Usher nb) in The Netherlands was estimated as
0.104. To determine if marker alleles could be used to differentiate
Usher type IIa from Usher IIb, parental chromosomes of the 26 Usher II
a families were analysed for significant non-random association of spe
cific alleles from flanking loci with USH2a, but no linkage disequilib
rium was observed in this Dutch population.