Mg. Goodwin et C. Anthony, CHARACTERIZATION OF A NOVEL METHANES DEHYDROGENASE CONTAINING A BA2-SITE( ION AT THE ACTIVE), Biochemical journal, 318, 1996, pp. 673-679
The quinoprotein methanol dehydrogenase (MDH) contains a Ca2+ ion at t
he active site. Ca2+-free enzyme (from a processing mutant) was used t
o obtain enzyme containing Sr2+ or Ba2+, the Ba2+-MDH being the first
enzyme to be described in which a Ba2+ ion functions at the active sit
e. The activation energy for oxidation of methanol by Ba2+-MDH is less
than half that of the reaction catalysed by Ca2+-MDH (a difference of
21.4 kJ/mol), and the V-max value is 2-fold higher. The affinities of
Ba2+-MDH for substrate and activator are very much less than those of
Ca2+-MDH; the K-m for methanol is 3.5 mM (compared with 3 mu M) and t
he K-A for ammonia is 52 mM (compared with 2 mM). The different activi
ty of Ba2+-MDH is probably due to a change in the conformation of the
active site, leading to a decrease in the free energy of substrate bin
ding and hence a decrease in activation energy. The kinetic model for
Ba2+-MDH with respect to substrate and activator is consistent with pr
evious models for Ca2+-MDH. The pronounced deuterium isotope effect (6
.0-7.6) is influenced by ammonia, and is consistent with activation of
the pyrroloquinoline quinone reduction step by ammonia. Because of it
s low affinity for substrates, it is possible to prepare the oxidized
form of Ba2+-MDH. No spectral intermediates could be detected during r
eduction by added substrate, and so it is not possible to distinguish
between those mechanisms involving covalent substrate addition and tho
se involving only hydride transfer.