Background: Microtubules are tubular polymers of tubulin dimers, which
are arranged head-to-tail in protofilaments that run lengthwise along
the microtubules, giving them an overall structural polarity. Many of
the functions of microtubules depend on this polarity, including dire
cted intracellular transport and chromosome segregation during mitosis
. The determination of microtubule polarity for lengthwise views of mi
crotubules observed by electron microscopy has not previously been pos
sible. Here, we present methods for directly determining the polarity
of individual microtubules imaged by cryo-electron microscopy. Results
: When observed in vitreous ice by cryo-electron microscopy, microtubu
les with skewed protofilaments show arrowhead moire patterns, We have
used centrosome nucleated microtubules to relate the directionality of
the moire patterns to microtubule polarity, We show that the arrowhea
ds point towards the plus end of microtubules with protofilaments havi
ng a right-handed skew, and towards the minus end of microtubules with
protofilaments having a left-handed skew, We describe two methods for
determining the handedness of the protofilament skew. The first metho
d uses two or more tilted views. The second method involves analysis o
f the diffraction patterns of the microtubule images. Conclusions: It
is now possible to determine directly the polarity of in vitro assembl
ed microtubules from cryo-electron micrographs. This will be helpful i
n a number of types of studies, including studies of the three-dimensi
onal structure of microtubules interacting with motor proteins, as kno
wledge of the polarity of the microtubule is essential to understand m
otor directionality.