The kinetics of CO binding to cytochrome P450, as measured by the flas
h photolysis technique, is a powerful probe of P450 structure-function
relationships. The kinetics are sensitive to P450 conformation and dy
namics and are modulated by P450 interactions with substrates and othe
r components of the microsomal membrane. Application of a difference m
ethod to kinetic data analysis distinguishes the kinetic behavior of i
ndividual P450 forms in the microsomal membrane. This approach shows t
hat substrates differentially modulate the kinetics via: 1) changes in
P450 conformation/dynamics that either accelerate or reduce the bindi
ng rate; and/or 2) steric effects that reduce the rate. Both mechanism
s are observed, the relative contributions of each varying in a substr
ate- and P450-dependent manner. In addition to microsomes, substrate i
nteractions with individual P450s can be similarly probed using expres
sed P450s. Experiments with baculovirus-expressed human P450 3A4 show
that this P450 consists of multiple conformers with distinct substrate
specificities, an observation which provides a basis for its recognit
ion of a wide array of structurally diverse substrates. These studies
thus demonstrate the utility of CO binding kinetics in elucidating fun
damental P450-substrate interactions in a biological membrane environm
ent.